Obama faces delicate task with CIA

By Mark Mazzetti and Scott Shane

updated 12:48 a.m. ET Dec. 3, 2008

WASHINGTON - For two years on the presidential campaign trail, Barack Obama rallied crowds with strongly worded critiques of the Bush administration’s most controversial counterterrorism programs, from hiding terrorism suspects in secret Central Intelligence Agency jails to questioning them with methods he denounced as torture.

Now Mr. Obama must take charge of the C.I.A., in what is already proving to be one of the more treacherous patches of his transition to the White House.

Last week, John O. Brennan , a C.I.A. veteran who was widely seen as Mr. Obama’s likeliest choice to head the intelligence agency, withdrew his name from consideration after liberal critics attacked his alleged role in the agency’s detention and interrogation program. Mr. Brennan protested that he had been a “strong opponent” within the agency of harsh interrogation tactics, yet Mr. Obama evidently decided that nominating Mr. Brennan was not worth a battle with some of his most ardent supporters on the left.

Mr. Obama’s search for someone else and his future relationship with the agency are complicated by the tension between his apparent desire to make a clean break with Bush administration policies he has condemned and concern about alienating an agency with a central role in the campaign against Al Qaeda .

Mark M. Lowenthal, an intelligence veteran who left a senior post at the C.I.A. in 2005, said Mr. Obama’s decision to exclude Mr. Brennan from contention for the top job had sent a message that “if you worked in the C.I.A. during the war on terror, you are now tainted,” and had created anxiety in the ranks of the agency’s clandestine service.

One of the first issues Mr. Obama must grapple with is the future of C.I.A. detention: will the agency continue to hold prisoners secretly, question them using more aggressive methods than allowed for military interrogators, and transfer terrorism suspects to countries with a history of using torture?

During the presidential campaign, a constant theme for Mr. Obama was the need to restore “American values” to the fight against terrorism. He pledged to banish secret C.I.A. interrogation rules and require all American interrogators to follow military guidelines, set out in the Army Field Manual on interrogation.

In a speech last year, Mr. Obama cast the matter as a practical issue, as well as a moral one. “We cannot win a war unless we maintain the high ground and keep the people on our side,” he said. “But because the administration decided to take the low road, our troops have more enemies.”

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On Wednesday, a dozen retired generals and admirals are to meet with senior Obama advisers to urge him to stand firm against any deviation from the military’s noncoercive interrogation rules.

But even some senior Democratic lawmakers who are vehement critics of the Bush administration’s interrogation policies seemed reluctant in recent interviews to commit the new administration to following the Army Field Manual in all cases.

Senator Dianne Feinstein , the California Democrat who will take over as chairman of the Senate Intelligence Committee in January, led the fight this year to force the C.I.A. to follow military interrogation rules. Her bill was passed by Congress but vetoed by President Bush.

But in an interview on Tuesday, Mrs. Feinstein indicated that extreme cases might call for flexibility. “I think that you have to use the noncoercive standard to the greatest extent possible,” she said, raising the possibility that an imminent terrorist threat might require special measures.

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